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Variant Analysis Supported file formats


File formats supported in Ingenuity Variant Analysis (IVA)

How To Add and Use Sample Metadata


Sample MetaData, Pedigrees, Clinical Annotation, Subject Identifiers (IVA)

My Libraries


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Variants Table Columns and Annotations


Ingenuity Variant Analysis | Variants, Annotation, Allele Fraction, SIFT, Genotype (IVA)

Copy Number Analysis


Key words: copy number variant, copy number variants, CNV (IVA)

FAQs on Analytics


Ingenuity Variant Analysis | Sex Assignment, Inferred Activity (IVA)

License Errors: What does "The server does not have a license for this product" mean?


CLC Genomics Workbench

License Errors: What does "Unknown License-ID" mean?


CLC Genomics Workbench

License Errors: What does "Error code: LMX_FILE_READ_ERROR" mean?


CLC Genomics Workbench

License Errors: What does "The license is not valid..." mean?


CLC Genomics Workbench

License Errors: What does "Version not covered by license" mean?


CLC Genomics Workbench

My Filters


Ingenuity Variant Analysis | The article describes the My Filters feature and its usage.

Publish using Ingenuity Variant Analysis


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Usual Suspects Option in the Confidence Filter


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Counteract variants effect on known signaling pathways


Ingenuity Variant Analysis | drugs, signaling pathway, druggable, counteract (IVA)

Pathways Interpretation


Ingenuity Variant Analysis | pathways interpretation, significant pathways, pathways association, signaling pathways, druggable pathways (IVA)

Export in Variant Analysis


Ingenuity Variant Analysis | Exporting, VCF export, Tab-delimited file, PNG, Pathway Export (IVA)

The Ingenuity Knowledge Base for Variant Analysis


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Cancer Driver Variants Filter


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Variant Analysis Technical Requirements


Ingenuity Variant Analysis | Technical Requirements for Variant Analysis (IVA)

Creating an Analysis in Variant Analysis


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Glossary for Variant Analysis


Ingenuity Variant Analysis | Gene model, mitochondrial genes, mitochondria, promoter (IVA)

User Defined Variants in Variant Analysis


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Physical Location Filter


Ingenuity Variant Analysis | Ingenuity variant Analysis (IVA)

Pathway Legend


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Sharing in Variant Analysis


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Pharmacogenetics Filter


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Custom Annotation


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Quantitative Trait Tutorial


Ingenuity Variant Analysis | Quantitative Trait, Clinical Features, Clinical Trait, Trait, QT (IVA)

Ingenuity Variant Analysis and Biobase HGMD integration


Ingenuity Variant Analysis | Biobase, HGMD, Integration (IVA)

Variant Analysis License Agreement and Privacy Policy


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Training and Scientific Seminars


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Citing Ingenuity Variant Analysis


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Upload your Sample


Ingenuity Variant Analysis | How to upload, metadata, datastream uploader (IVA)

Ingenuity Inferred Activating Mutations Algorithm


Ingenuity Variant Analysis | inferred, mutation, gain of function (IVA)

Causal Network Analysis in the Biological Context Filter


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Statistical Association


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Pre-Filtering of samples


Ingenuity Variant Analysis | WGS, pre-filter, whole genome sequencing (IVA)

Common Variants Filter


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Biological Context


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Genetic Analysis Filter


Ingenuity Variant Analysis | mendelian, inheritance, transmitted, co-segregation, genotype (IVA)

Filtering for X-linked recessive diseases in a trio


Ingenuity Variant Analysis | X-linked, trio (IVA)

Confidence Filter


Ingenuity Variant Analysis | Call Quality, Upstream Pipeline, Read Depth, Allele Fraction, Genotype Quality, and Usual Suspects (IVA)

Exploring Your Results in Variant Analysis


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Phenotype-Driven Ranking Filter


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

FAQs about Statistical Calculation


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

Predicted Deleterious Filter


Ingenuity Variant Analysis | Ingenuity Variant Analysis (IVA)

License Errors: What does LMX_NOT_NETWORK_FEATURE in the Workbench mean?


CLC Genomics Workbench

License Errors: What does "The requested license order is not available for the specified Host ID" mean?


CLC Genomics Workbench

License Errors: What does "Unable to connect to license server" mean?


CLC Genomics Workbench

License Errors: What does "Your license has expired" mean?


CLC Genomics Workbench

License Errors: What does "XF Error: Rejected actively from license server!" mean?


CLC Genomics Workbench

License Errors: What does "The License Web-Service could not be contacted. Unknown host: secure.clcbio.com" mean?


CLC Genomics Workbench

License Errors: What does "No more licenses available" mean (network license)?


CLC Genomics Workbench

License Errors: What does "Your license can not be used on a Terminal Server" mean (with static license)?


CLC Genomics Workbench

License Errors: What does "No valid application license could be found" mean after the jobs are submitted to the grid?


CLC Genomics Workbench

How can I keep the input sample name in the extracted consensus sequences from mappings?


CLC Genomics Workbench

FAQ